| Family1 | Species1 | Family2 | Species2 | SCUS score | Similarity |
| Malvaceae | Gossypium raimondii | Cucurbitaceae | Momordica charantia | 8.98 | Similar |
| Malvaceae | Gossypium raimondii | Musaceae | Musa acuminata subsp. malaccensis | 6.79 | Moderately similar |
| Malvaceae | Gossypium raimondii | Solanaceae | Nicotiana attenuata | 8.95 | Similar |
| Malvaceae | Gossypium raimondii | Solanaceae | Nicotiana sylvestris | 9.02 | Highly Similar |
| Malvaceae | Gossypium raimondii | Solanaceae | Nicotiana tabacum | 8.99 | Similar |
| Malvaceae | Gossypium raimondii | Solanaceae | Nicotiana tomentosiformis | 9.03 | Highly Similar |
| Malvaceae | Gossypium raimondii | Poaceae | Oryza brachyantha | 4.98 | Dis similar |
| Malvaceae | Gossypium raimondii | Poaceae | Oryza sativa Japonica Group | 5.02 | Moderately similar |
| Malvaceae | Gossypium raimondii | Poaceae | Panicum hallii | 4.62 | Dis similar |
| Malvaceae | Gossypium raimondii | Poaceae | Panicum virgatum | 4.79 | Dis similar |
| Malvaceae | Gossypium raimondii | Fabaceae | Phaseolus vulgaris | 8.10 | Similar |
| Malvaceae | Gossypium raimondii | Fabaceae | Prosopis alba | 8.76 | Similar |
| Malvaceae | Gossypium raimondii | Brassicaceae | Raphanus sativus | 5.65 | Moderately similar |
| Malvaceae | Gossypium raimondii | Euphorbiaceae | Ricinus communis | 8.05 | Similar |
| Malvaceae | Gossypium raimondii | Poaceae | Saccharum officinarum | 7.46 | Similar |
| Malvaceae | Gossypium raimondii | Pedaliaceae | Sesamum indicum | 8.62 | Similar |
| Malvaceae | Gossypium raimondii | Poaceae | Setaria italica | 4.77 | Dis similar |
| Malvaceae | Gossypium raimondii | Poaceae | Setaria viridis | 4.72 | Dis similar |
| Malvaceae | Gossypium raimondii | Solanaceae | Solanum lycopersicum | 9.21 | Highly Similar |
| Malvaceae | Gossypium raimondii | Solanaceae | Solanum melongena | 9.64 | Highly Similar |