| Family1 | Species1 | Family2 | Species2 | SCUS score | Similarity |
| Asteraceae | Tagetes erecta | Poaceae | Zea mays | 0.68 | Dis similar |
| Asteraceae | Tagetes erecta | Poaceae | Sorghum bicolor | 0.52 | Dis similar |
| Asteraceae | Tagetes erecta | Poaceae | Aegilops tauschii subsp. strangulata | 0.38 | Dis similar |
| Asteraceae | Tagetes erecta | Poaceae | Triticum dicoccoides | 0.33 | Dis similar |
| Asteraceae | Tagetes erecta | Poaceae | Hordeum vulgare | 0.29 | Dis similar |
| Asteraceae | Tagetes erecta | Poaceae | Setaria italica | 0.29 | Dis similar |
| Asteraceae | Tagetes erecta | Poaceae | Setaria viridis | 0.29 | Dis similar |
| Asteraceae | Tagetes erecta | Poaceae | Panicum virgatum | 0.16 | Dis similar |
| Asteraceae | Tagetes erecta | Poaceae | Panicum hallii | 0.13 | Dis similar |
| Asteraceae | Tagetes erecta | Poaceae | Triticum aestivum | 0.00 | Dis similar |
| Malvaceae | Theobroma cacao | Fabaceae | Abrus precatorius | 9.73 | Highly Similar |
| Malvaceae | Theobroma cacao | Poaceae | Aegilops tauschii subsp. strangulata | 4.38 | Dis similar |
| Malvaceae | Theobroma cacao | Brassicaceae | Arabidopsis lyrata subsp. lyrata | 4.29 | Dis similar |
| Malvaceae | Theobroma cacao | Brassicaceae | Arabidopsis thaliana | 4.14 | Dis similar |
| Malvaceae | Theobroma cacao | Fabaceae | Arachis duranensis | 9.46 | Highly Similar |
| Malvaceae | Theobroma cacao | Fabaceae | Arachis hypogaea | 9.46 | Highly Similar |
| Malvaceae | Theobroma cacao | Fabaceae | Arachis ipaensis | 9.47 | Highly Similar |
| Malvaceae | Theobroma cacao | Cucurbitaceae | Benincasa hispida | 7.85 | Similar |
| Malvaceae | Theobroma cacao | Chenopodiaceae | Beta vulgaris subsp. vulgaris | 8.44 | Similar |
| Malvaceae | Theobroma cacao | Poaceae | Brachypodium distachyon | 4.86 | Dis similar |